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Homework assignment

Potential solutions

How do I do this in an easy but scalable way? (spoiler alert: it's ClickHouse)

DIY

Write an in-memory data aggregator that is basically a HashMap with symbols and their primary aggregated KPIs for the running minute. Pseudocode in Python because I'm comfortable with Python:

symbols = {}
while True:
    if minute_is_up():
        # parallel thread reads from queue (regular in-memory queue) and writes to RDBMS
        send_to_queue(symbols)
    quote = endpoint.get()
    if quote.symbol not in symbols:
        symbol = Symbol(open=quote.value)
        symbols[quote.symbol] = symbol
    else:
        symbol = symbols.get[quote.symbol]
    if symbol.max < quote.value:
        symbol.max = quote.value
    if symbol.min < quote.value:
        symbol.min = quote.value

@route("/candlestick", method="get")
def get_candlestick(symbol, minute):
    if minute_not_in_queue(minute) and minute_is_not_now(minute):
        candlestick = get_from_posrgres(symbol, minute)
    if not candlestick and minute_is_not_now(minute):
        candlestick = get_from_queue(symbol, minute)
    if not minute_is_not_now():
        candlestick = get_current(symbol)
    return candlestick

Potential issues can occur if database writes are a bottleneck, which will cause memory usage to grow, leading to a myriad of problems that make this approach not appealing right now.

Time Series DB

Time series databases are very good at storing timed events. The writes are fast, and queries on time ranges are also fast. It scales linearly. That's thanks to intelligent automatic partitioning on time fields.

TimescaleDB can be set up using a Docker image, and hit the ground running. The problem is that it will fill up the database with useless high resolution data. It will work well in this particular problem but I don't think it's the best solution.

Clickhouse

Why: If it's good enough for CERN, and it runs on a potato VM, then it's probably good enough for me.

ClickHouse supports a large variety of table engines, but for this purpose, described in the Python DIY solution, there is a table engine called AggregatingMergeTree. Storage requirements are modest, queries will be instant, scales well (vertically AND horizontally), it's good enough for Production.

Bonus reason: I played around with ClickHouse enough to make people happy with fast dashboards.

Others that crossed my mind

Flink, Spark, but they're slower and I'm rusty with the Java ecosystem.

We need some basic infrastructure

Scaleway Cloud (cheap and good)

Set up the scaleway CLI on my Mac:

brew install scw
scw init

Create new instance

Choosing DEV1-M instance size because 4GB of RAM @ 15€ per month, should be more than enough for the purpose.

# note the UUID of the instance to use later
scw instance server create type=DEV1-M zone=nl-ams-1 image=ubuntu_bionic name=tr-clickhouse ip=new
# keep checking the server status
scw instance server get zone=nl-ams-1 f40ff8bc-988c-40dd-912c-5de21032a30b -o json | jq -r ".state"
# once it's running, get the public ip address
scw instance server get zone=nl-ams-1 f40ff8bc-988c-40dd-912c-5de21032a30b -o json | jq -r ".public_ip.address"
# Good to go!
ssh root@51.15.116.117

Setup ClickHouse

Following the guide, and changing some minor elements:

apt-get -y install apt-transport-https ca-certificates dirmngr
apt-key adv --keyserver hkp://keyserver.ubuntu.com:80 --recv E0C56BD4
echo "deb https://repo.clickhouse.tech/deb/stable/ main/" | tee /etc/apt/sources.list.d/clickhouse.list
apt-get update
apt-get install -y clickhouse-server clickhouse-client
# specify password
systemctl start clickhouse-server

Solution

Running clickhouse

Clickhouse offers a variety of features that will be really useful:

  • The AggregatingMergeTree table family, which keeps a state of the current aggregated data, and updates it when new data arrives, without keeping all the rows
  • The CollapsingMergeTree table family, which allows rows to delete themselves automatically when marked for deletion, which can be useful when symbols get deleted. A log can be kept on S3 if necessary.
  • Aggregation states for all aggregation functions.

It comes with a few limitations, mainly to do with client library stability on Python in async mode, and with obscure error messages that can be received.

The DDL to create the quotes table is as follows:

The open/close values for each symbol will be kept as argMin and argMax aggregation states based on the value of the minute_start field. The values themselves will be treated as "micros" (the value * 1 million), and stored as integer for simplicity and speed. Alternatively, numeric types can be used.

A similar construction is made for the symbols table.

Running the consumer

  • Rename and set up config.json.example to connect to ClickHouse DB API (not HTTP).
  • Set up a virtualenv and install the requirements
  • start up the sample data generator
  • start up the consumer
# virtualenv
make venv
# start sample data generator
make generator
# Start consumer
make consumer

Data should be pouring in

Running the web service

make flask

Then go to either of the endpoints:

"Hot" stream

Upon inserting every quote value, the value is directed to an in-memory data structure: alerter.mem_storage.

Uses a dictionary to organize by symbol. For each symbol there's 2 data structures:

  • An ordered (by time) queue of entries. When a new entry is added to the right, old entries are removed from the left as long as they're older than 5 minutes.
  • An ordered list of prices. This converts the "is it hot" question to an O(1) complexity. Deletions and insertions are slower however, but Python optimizes them well

Notification is not implemented until the end, but it would probably work as a Kafka producer, and there can be many consumers that react to messages and send out push notifications. In case we run out of memory for this storage, horizontal scaling is possible, by partitioning the flow of data by the ISIN. If restarts and crashes (data loss that leads to missed notifications) are feared, in-memory storage can be substituted for an ACID-compliant RDBMS with time partitioning, and parallel processes that constantly take care to create new, and remove old partitions.